{
  "_id": "6ab38eda3d719c1f840912d2",
  "Package": "platetools",
  "Title": "Tools and Plots for Multi-Well Plates",
  "Version": "0.1.6",
  "Authors@R": "person(\"Scott\", \"Warchal\", email = \"scott.warchal@gmail.com\", role = c(\"aut\", \"cre\"))",
  "Description": "Collection of functions for working with multi-well\nmicrotitre plates, mainly 96, 384 and 1536 well plates.",
  "License": "MIT + file LICENSE",
  "URL": "https://github.com/swarchal/platetools",
  "BugReports": "https://github.com/swarchal/platetools/issues",
  "Encoding": "UTF-8",
  "LazyData": "true",
  "RoxygenNote": "7.1.1",
  "Repository": "https://swarchal.r-universe.dev",
  "Date/Publication": "2024-03-07 16:15:25 UTC",
  "RemoteUrl": "https://github.com/swarchal/platetools",
  "RemoteRef": "HEAD",
  "RemoteSha": "60229560ea51fe680b214e5add71544a0741e4c7",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-09-23 08:29:27 UTC",
    "User": "root"
  },
  "Author": "Scott Warchal [aut, cre]",
  "Maintainer": "Scott Warchal <scott.warchal@gmail.com>",
  "_user": "swarchal",
  "_type": "src",
  "_file": "platetools_0.1.6.tar.gz",
  "_fileid": "https://r2.ropensci.org/3f160859aa553fd9b419d1d045990799a3baed0c29644ce6fa0543ee57076a0b",
  "_filesize": 180265,
  "_sha256": "3f160859aa553fd9b419d1d045990799a3baed0c29644ce6fa0543ee57076a0b",
  "_expires": "2027-01-01T08:33:28.000Z",
  "_created": "2026-09-23T08:29:27.000Z",
  "_published": "2026-09-23T08:33:30.529Z",
  "_jobs": [
    {
      "job": 107104182934,
      "time": 184,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "10739303572"
    },
    {
      "job": 107104182921,
      "time": 158,
      "config": "linux-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "10739164371"
    },
    {
      "job": 107104183014,
      "time": 192,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "10740120559"
    },
    {
      "job": 107104183008,
      "time": 156,
      "config": "macos-release-arm64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "10739738368"
    },
    {
      "job": 107103239311,
      "time": 176,
      "config": "source",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "10740035513"
    },
    {
      "job": 107104182957,
      "time": 103,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "10739609263"
    },
    {
      "job": 107104183086,
      "time": 89,
      "config": "windows-devel-x86_64",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "10739313491"
    },
    {
      "job": 107104183070,
      "time": 83,
      "config": "windows-oldrel-x86_64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "10739554373"
    },
    {
      "job": 107104183012,
      "time": 93,
      "config": "windows-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "10739524443"
    }
  ],
  "_host": "GitHub-Actions",
  "_buildurl": "https://github.com/r-universe/swarchal/actions/runs/35837125143",
  "_status": "success",
  "_upstream": "https://github.com/swarchal/platetools",
  "_commit": {
    "id": "60229560ea51fe680b214e5add71544a0741e4c7",
    "author": "Scott Warchal <scott.warchal@crick.ac.uk>",
    "committer": "GitHub <noreply@github.com>",
    "message": "Merge pull request #36 from teunbrand/ggplot2_3.5.0\n\nUpdate test expectations",
    "time": 1709828125
  },
  "_maintainer": {
    "name": "Scott Warchal",
    "email": "scott.warchal@gmail.com",
    "login": "swarchal",
    "description": "High {throughput, content} screening",
    "uuid": 10051679
  },
  "_distro": "resolute",
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 3.1.0",
      "role": "Depends"
    },
    {
      "package": "RColorBrewer",
      "role": "Imports"
    },
    {
      "package": "ggplot2",
      "version": ">= 2.2.0",
      "role": "Imports"
    },
    {
      "package": "testthat",
      "role": "Suggests"
    },
    {
      "package": "viridis",
      "role": "Suggests"
    }
  ],
  "_owner": "swarchal",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [],
  "_tags": [],
  "_topics": [
    "biology",
    "ggplot2",
    "lab"
  ],
  "_stars": 56,
  "_contributors": [
    {
      "user": "swarchal",
      "count": 24,
      "uuid": 10051679
    },
    {
      "user": "aaronmck",
      "count": 1,
      "uuid": 1264127
    },
    {
      "user": "charles-plessy",
      "count": 1,
      "uuid": 1834905
    },
    {
      "user": "kkovary",
      "count": 1,
      "uuid": 6601956
    },
    {
      "user": "teunbrand",
      "count": 1,
      "uuid": 49372158
    }
  ],
  "_userbio": {
    "uuid": 10051679,
    "type": "user",
    "name": "Scott Warchal",
    "followers": 36,
    "description": "High {throughput, content} screening"
  },
  "_downloads": {
    "count": 311,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/platetools"
  },
  "_devurl": "https://github.com/swarchal/platetools",
  "_searchresults": 142,
  "_rbuild": "4.6.1",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/manual.pdf",
    "extra/platetools.html",
    "extra/readme.html",
    "extra/readme.md",
    "LICENSE"
  ],
  "_homeurl": "https://github.com/swarchal/platetools",
  "_realowner": "swarchal",
  "_cranurl": true,
  "_releases": [
    {
      "version": "0.0.1",
      "date": "2016-06-10"
    },
    {
      "version": "0.0.2",
      "date": "2016-10-07"
    },
    {
      "version": "0.1.0",
      "date": "2018-03-03"
    },
    {
      "version": "0.1.1",
      "date": "2018-06-25"
    },
    {
      "version": "0.1.2",
      "date": "2019-04-24"
    },
    {
      "version": "0.1.3",
      "date": "2020-05-06"
    },
    {
      "version": "0.1.5",
      "date": "2021-06-03"
    },
    {
      "version": "0.1.7",
      "date": "2024-03-07"
    }
  ],
  "_exports": [
    "b_grid",
    "b_map",
    "b_score",
    "bhit_map",
    "dist_map",
    "fill_plate",
    "hit_grid",
    "hit_map",
    "legend_title",
    "med_smooth",
    "missing_wells",
    "num_to_well",
    "pc_grid",
    "pc_map",
    "pchit_grid",
    "pchit_map",
    "plate_effect",
    "plate_map",
    "plate_map_grid",
    "plate_map_grid_scale",
    "plate_map_scale",
    "plate_matrix",
    "plt12",
    "plt1536",
    "plt24",
    "plt384",
    "plt48",
    "plt6",
    "plt96",
    "raw_grid",
    "raw_map",
    "read_map",
    "rotate_plate",
    "set_block",
    "well_to_num",
    "z_grid",
    "z_map"
  ],
  "_datasets": [
    {
      "name": "readmap_data",
      "title": "example data in a plate map form",
      "object": "readmap_data",
      "class": [
        "data.frame"
      ],
      "fields": [
        "V1",
        "V2",
        "V3",
        "V4",
        "V5",
        "V6",
        "V7",
        "V8",
        "V9",
        "V10",
        "V11",
        "V12"
      ],
      "rows": 8,
      "table": true,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "b_grid",
      "title": "Plots multiple b-scored normalised platemaps",
      "topics": [
        "b_grid"
      ]
    },
    {
      "page": "b_map",
      "title": "Plots a heatmap of b-score normalised values in a plate layout",
      "topics": [
        "b_map"
      ]
    },
    {
      "page": "b_score",
      "title": "2 way median polish",
      "topics": [
        "b_score"
      ]
    },
    {
      "page": "bhit_map",
      "title": "Platemap to identify 'hits' following a B-score normalisation",
      "topics": [
        "bhit_map"
      ]
    },
    {
      "page": "check_plate_input",
      "title": "checks plate input for dodgy well plate combinations",
      "topics": [
        "check_plate_input"
      ]
    },
    {
      "page": "dist_map",
      "title": "Plots distributions per well in a plate layout",
      "topics": [
        "dist_map"
      ]
    },
    {
      "page": "fill_plate",
      "title": "Fill in missing wells",
      "topics": [
        "fill_plate"
      ]
    },
    {
      "page": "hit_grid",
      "title": "Plots multiple platemaps with and identifies hits",
      "topics": [
        "hit_grid"
      ]
    },
    {
      "page": "hit_map",
      "title": "Platemap to identify 'hits' in a screen",
      "topics": [
        "hit_map"
      ]
    },
    {
      "page": "is_1536",
      "title": "internal 1536 plate function for plate_map",
      "topics": [
        "is_1536"
      ]
    },
    {
      "page": "is_old_ggplot",
      "title": "check ggplot2 version",
      "topics": [
        "is_old_ggplot"
      ]
    },
    {
      "page": "legend_title",
      "title": "change legend title",
      "topics": [
        "legend_title"
      ]
    },
    {
      "page": "list_to_dataframe",
      "title": "Converts list to a dataframe in a sensible way",
      "topics": [
        "list_to_dataframe"
      ]
    },
    {
      "page": "med_smooth",
      "title": "2-way median smooth",
      "topics": [
        "med_smooth"
      ]
    },
    {
      "page": "missing_wells",
      "title": "Returns wells that are missing from a complete plate",
      "topics": [
        "missing_wells"
      ]
    },
    {
      "page": "num_to_well",
      "title": "Converts numbers to well labels",
      "topics": [
        "num_to_well"
      ]
    },
    {
      "page": "pc_grid",
      "title": "Plots multiple platemaps as a heatmap of the first principal component.",
      "topics": [
        "pc_grid"
      ]
    },
    {
      "page": "pc_map",
      "title": "Principal component heatmap in a plate layout",
      "topics": [
        "pc_map"
      ]
    },
    {
      "page": "pchit_grid",
      "title": "Plots multiple heatmaps identifying hits from the first principal component",
      "topics": [
        "pchit_grid"
      ]
    },
    {
      "page": "pchit_map",
      "title": "Plots a heatmap identifying hits from the first principal component",
      "topics": [
        "pchit_map"
      ]
    },
    {
      "page": "plate_effect",
      "title": "Two way-median smooth on a plate map",
      "topics": [
        "plate_effect"
      ]
    },
    {
      "page": "plate_map",
      "title": "creates dataframe of row,column,data from wellID and data",
      "topics": [
        "plate_map"
      ]
    },
    {
      "page": "plate_map_grid",
      "title": "creates dataframe of row, column, plate_id from data regarding wellIDs",
      "topics": [
        "plate_map_grid"
      ]
    },
    {
      "page": "plate_map_grid_scale",
      "title": "creates dataframe of row, column, plate_id from data regarding wellIDs",
      "topics": [
        "plate_map_grid_scale"
      ]
    },
    {
      "page": "plate_map_multiple",
      "title": "row, column for multiple features",
      "topics": [
        "plate_map_multiple"
      ]
    },
    {
      "page": "plate_map_scale",
      "title": "creates dataframe of row, column, and scaled data from well IDs",
      "topics": [
        "plate_map_scale"
      ]
    },
    {
      "page": "plate_matrix",
      "title": "plate layout matrix from well IDs",
      "topics": [
        "plate_matrix"
      ]
    },
    {
      "page": "plt12",
      "title": "ggplot plate object",
      "topics": [
        "plt12"
      ]
    },
    {
      "page": "plt1536",
      "title": "ggplot plate object",
      "topics": [
        "plt1536"
      ]
    },
    {
      "page": "plt24",
      "title": "ggplot plate object",
      "topics": [
        "plt24"
      ]
    },
    {
      "page": "plt384",
      "title": "ggplot plate object",
      "topics": [
        "plt384"
      ]
    },
    {
      "page": "plt48",
      "title": "ggplot plate object",
      "topics": [
        "plt48"
      ]
    },
    {
      "page": "plt6",
      "title": "ggplot plate object",
      "topics": [
        "plt6"
      ]
    },
    {
      "page": "plt96",
      "title": "ggplot plate object",
      "topics": [
        "plt96"
      ]
    },
    {
      "page": "raw_grid",
      "title": "Plots multiple platemaps with heatmap of raw values",
      "topics": [
        "raw_grid"
      ]
    },
    {
      "page": "raw_map",
      "title": "Plots a platemap with heatmap of raw values",
      "topics": [
        "raw_map"
      ]
    },
    {
      "page": "read_map",
      "title": "Annotates dataframe with metadata in a platemap matrix",
      "topics": [
        "read_map"
      ]
    },
    {
      "page": "readmap_data",
      "title": "example data in a plate map form",
      "topics": [
        "readmap_data"
      ]
    },
    {
      "page": "rotate_plate",
      "title": "rotates matrix by 180 degrees",
      "topics": [
        "rotate_plate"
      ]
    },
    {
      "page": "set_block",
      "title": "Set values in rectangular areas of a plate",
      "topics": [
        "set_block"
      ]
    },
    {
      "page": "well_to_num",
      "title": "Converts well labels to numbers",
      "topics": [
        "well_to_num"
      ]
    },
    {
      "page": "z_grid",
      "title": "Plots multiple platemaps with heatmap of scaled values",
      "topics": [
        "z_grid"
      ]
    },
    {
      "page": "z_map",
      "title": "Plots a platemap with heatmap of scaled values",
      "topics": [
        "z_map"
      ]
    }
  ],
  "_readme": "https://github.com/swarchal/platetools/raw/HEAD/README.md",
  "_rundeps": [
    "cli",
    "cpp11",
    "farver",
    "ggplot2",
    "glue",
    "gtable",
    "isoband",
    "labeling",
    "lifecycle",
    "R6",
    "RColorBrewer",
    "rlang",
    "S7",
    "scales",
    "vctrs",
    "viridisLite",
    "withr"
  ],
  "_score": 6.201506367053239,
  "_indexed": true,
  "_nocasepkg": "platetools",
  "_universes": [
    "swarchal"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.1.6",
      "date": "2026-09-23T08:32:22.000Z",
      "distro": "resolute",
      "commit": "60229560ea51fe680b214e5add71544a0741e4c7",
      "fileid": "https://r2.ropensci.org/947ef8fa5fbfa0b35728929bc2fff6967564018c1243f8e00b1dce771de88ee7",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/swarchal/actions/runs/35837125143"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "0.1.6",
      "date": "2026-09-23T08:31:59.000Z",
      "distro": "resolute",
      "commit": "60229560ea51fe680b214e5add71544a0741e4c7",
      "fileid": "https://r2.ropensci.org/c17b4a03d3168f66cccffa561b0c91ec7dc7931b80f0fd7b1a30253f0dd78655",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/swarchal/actions/runs/35837125143"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.1.6",
      "date": "2026-09-23T08:32:05.000Z",
      "commit": "60229560ea51fe680b214e5add71544a0741e4c7",
      "fileid": "https://r2.ropensci.org/8ee6efcbf98916bff65c64616f7714f32b021eb13ef6eca89d700031c8d73071",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/swarchal/actions/runs/35837125143"
    },
    {
      "r": "4.6.1",
      "os": "mac",
      "version": "0.1.6",
      "date": "2026-09-23T08:31:38.000Z",
      "commit": "60229560ea51fe680b214e5add71544a0741e4c7",
      "fileid": "https://r2.ropensci.org/bed068654e92cea4dc49f33554a25a47dc65127d1fe23aa24aaeac83b48cd2e2",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/swarchal/actions/runs/35837125143"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.1.6",
      "date": "2026-09-23T08:31:30.000Z",
      "commit": "60229560ea51fe680b214e5add71544a0741e4c7",
      "fileid": "https://r2.ropensci.org/2b4e1543182fd43416add8f16d26b400a0b6270f8e550361eb01e94d2c999a59",
      "status": "success",
      "buildurl": "https://github.com/r-universe/swarchal/actions/runs/35837125143"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.1.6",
      "date": "2026-09-23T08:30:35.000Z",
      "commit": "60229560ea51fe680b214e5add71544a0741e4c7",
      "fileid": "https://r2.ropensci.org/b350cf486e1aaff250162d3d28512b649df149ca9cd6e881ffb1954de9f0d091",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/swarchal/actions/runs/35837125143"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.1.6",
      "date": "2026-09-23T08:30:32.000Z",
      "commit": "60229560ea51fe680b214e5add71544a0741e4c7",
      "fileid": "https://r2.ropensci.org/c76e66b391e6dc11b0d98e9b1807695d5cf1ee4d3ec5af3b48a4c0c59b1e7253",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/swarchal/actions/runs/35837125143"
    },
    {
      "r": "4.6.1",
      "os": "win",
      "version": "0.1.6",
      "date": "2026-09-23T08:30:41.000Z",
      "commit": "60229560ea51fe680b214e5add71544a0741e4c7",
      "fileid": "https://r2.ropensci.org/56d1997ade859907944b7574a5a255304c86d0ac8ed3d924a62c0bde67ab94e2",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/swarchal/actions/runs/35837125143"
    }
  ]
}